Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGB4Q9UN71 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGB4Q9UN71 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.46■□□□□ 0.22
PCDHGB4Q9UN71 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGB4Q9UN71 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGB4Q9UN71 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 AC092364.2-201ENST00000596710 2692 ntBASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 CYP2T1P-202ENST00000641596 2535 ntBASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 AC009533.2-201ENST00000543664 586 ntBASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 AL138831.2-201ENST00000606564 490 ntBASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 AL353801.3-201ENST00000609898 542 ntBASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGB4Q9UN71 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 BX276092.5-203ENST00000456199 560 ntBASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGB4Q9UN71 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGB4Q9UN71 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms