Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 AC019129.2-201ENST00000609837 1235 ntBASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 AL121772.3-201ENST00000610840 674 ntBASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 AC010460.3-201ENST00000511359 1579 ntBASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCM2LQ9NUG4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 CHCHD2P8-201ENST00000429873 447 ntBASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 AP000867.3-201ENST00000524675 377 ntBASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCM2LQ9NUG4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 ME2P1-201ENST00000426028 1970 ntBASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 AC068472.1-201ENST00000474589 881 ntBASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 AC006538.1-201ENST00000567905 1585 ntBASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 AC005052.1-201ENST00000625181 2492 ntBASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 AC092384.3-202ENST00000564646 2873 ntBASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCM2LQ9NUG4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCM2LQ9NUG4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.1■□□□□ 0.17
CCM2LQ9NUG4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.1■□□□□ 0.17
CCM2LQ9NUG4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCM2LQ9NUG4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCM2LQ9NUG4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCM2LQ9NUG4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms