Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 AC104417.2-201ENST00000562989 1793 ntBASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 AC073957.3-201ENST00000609998 6758 ntBASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 TNN-202ENST00000621086 4234 ntTSL 5 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 PHGDH-209ENST00000641074 1780 ntBASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC8.57□□□□□ -1.04
CDC42SE1Q9NRR8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms