Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 AC079602.3-201ENST00000623931 403 ntBASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 AC144831.1-201ENST00000573312 2656 ntBASIC14.79□□□□□ -0.04
C12orf4Q9NQ89 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 AC104640.1-201ENST00000562617 2109 ntBASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 AC116353.5-201ENST00000638148 1699 ntBASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 PAUPAR-201ENST00000630360 2965 ntBASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.78□□□□□ -0.04
C12orf4Q9NQ89 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf4Q9NQ89 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 HLA-F-220ENST00000434407 884 ntBASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 AC145285.6-201ENST00000604632 637 ntBASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 AL139327.4-201ENST00000612362 153 ntBASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.77□□□□□ -0.05
C12orf4Q9NQ89 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms