Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 AC092068.3-201ENST00000587894 2016 ntBASIC15.68■□□□□ 0.1
UBQLN3Q9H347 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
UBQLN3Q9H347 AL590787.1-201ENST00000568856 1315 ntBASIC15.68■□□□□ 0.1
UBQLN3Q9H347 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 AP002414.1-201ENST00000391405 1147 ntBASIC15.67■□□□□ 0.1
UBQLN3Q9H347 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 PTCHD3P3-201ENST00000403073 906 ntBASIC15.67■□□□□ 0.1
UBQLN3Q9H347 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 AC108751.1-201ENST00000490852 363 ntBASIC15.67■□□□□ 0.1
UBQLN3Q9H347 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 AC124947.2-201ENST00000547118 1133 ntBASIC15.67■□□□□ 0.1
UBQLN3Q9H347 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 AC027601.4-201ENST00000611259 610 ntBASIC15.67■□□□□ 0.1
UBQLN3Q9H347 FAM197Y3-203ENST00000618346 717 ntBASIC15.67■□□□□ 0.1
UBQLN3Q9H347 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBQLN3Q9H347 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 AC078925.2-201ENST00000624013 1973 ntBASIC15.66■□□□□ 0.1
UBQLN3Q9H347 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.66■□□□□ 0.1
UBQLN3Q9H347 AL591424.1-201ENST00000442569 1213 ntBASIC15.66■□□□□ 0.1
UBQLN3Q9H347 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBQLN3Q9H347 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms