Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 RCN1P1-201ENST00000400413 996 ntBASIC17.04■□□□□ 0.32
VPS11Q9H270 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS11Q9H270 CHCHD2P8-201ENST00000429873 447 ntBASIC17.04■□□□□ 0.32
VPS11Q9H270 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.04■□□□□ 0.32
VPS11Q9H270 AL121672.3-201ENST00000608644 468 ntBASIC17.04■□□□□ 0.32
VPS11Q9H270 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS11Q9H270 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS11Q9H270 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS11Q9H270 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VPS11Q9H270 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VPS11Q9H270 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS11Q9H270 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS11Q9H270 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 TP73-AS1-210ENST00000637775 1455 ntBASIC17.04■□□□□ 0.32
VPS11Q9H270 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS11Q9H270 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VPS11Q9H270 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
VPS11Q9H270 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS11Q9H270 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS11Q9H270 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.03■□□□□ 0.32
VPS11Q9H270 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.03■□□□□ 0.32
VPS11Q9H270 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 TMPOP1-202ENST00000424642 1267 ntBASIC17.03■□□□□ 0.32
VPS11Q9H270 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS11Q9H270 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
VPS11Q9H270 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS11Q9H270 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VPS11Q9H270 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VPS11Q9H270 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS11Q9H270 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 AC103702.1-201ENST00000548801 2630 ntBASIC17.02■□□□□ 0.32
VPS11Q9H270 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.02■□□□□ 0.32
VPS11Q9H270 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
VPS11Q9H270 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.02■□□□□ 0.32
VPS11Q9H270 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
VPS11Q9H270 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.02■□□□□ 0.32
VPS11Q9H270 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.02■□□□□ 0.32
VPS11Q9H270 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VPS11Q9H270 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.02■□□□□ 0.32
VPS11Q9H270 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.02■□□□□ 0.32
VPS11Q9H270 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
VPS11Q9H270 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VPS11Q9H270 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VPS11Q9H270 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS11Q9H270 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.02■□□□□ 0.32
VPS11Q9H270 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.02■□□□□ 0.32
VPS11Q9H270 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.02■□□□□ 0.31
VPS11Q9H270 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.02■□□□□ 0.31
VPS11Q9H270 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
VPS11Q9H270 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms