Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 AP002414.1-201ENST00000391405 1147 ntBASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 LINC00265-3P-201ENST00000447588 903 ntBASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 AC104819.1-201ENST00000504587 486 ntBASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 AC012615.1-201ENST00000565797 1299 ntBASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 AL513523.2-202ENST00000427283 2040 ntBASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 PKD1P5-201ENST00000532415 10291 ntBASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2J3Q9H1A7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 HLA-A-202ENST00000376806 1854 ntBASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 ABCD1P5-201ENST00000445663 754 ntBASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 HLA-J-202ENST00000469281 1241 ntBASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 AC074051.2-201ENST00000565115 352 ntBASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2J3Q9H1A7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.64■□□□□ 0.1
POLR2J3Q9H1A7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.64■□□□□ 0.1
POLR2J3Q9H1A7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms