Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 MIR6805-201ENST00000615055 62 ntBASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 MIR6799-201ENST00000620297 69 ntBASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.99■□□□□ 0.95
CNTNAP4Q9C0A0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNTNAP4Q9C0A0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 KRT8P39-201ENST00000396270 1433 ntBASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 KRT8P12-202ENST00000472924 1397 ntBASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 SPDYE17-201ENST00000412399 783 ntBASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 AC099568.2-201ENST00000609194 695 ntBASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTNAP4Q9C0A0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 AC008764.6-201ENST00000595909 2069 ntBASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 RN7SL837P-201ENST00000463010 287 ntBASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 KRT17P8-201ENST00000540749 863 ntBASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 SRD5A3P1-201ENST00000603021 949 ntBASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTNAP4Q9C0A0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CNTNAP4Q9C0A0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms