Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.44■□□□□ 0.86
RPAP1Q9BWH6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPAP1Q9BWH6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.44■□□□□ 0.86
RPAP1Q9BWH6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPAP1Q9BWH6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.44■□□□□ 0.86
RPAP1Q9BWH6 AC092919.2-201ENST00000623631 1645 ntBASIC20.44■□□□□ 0.86
RPAP1Q9BWH6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPAP1Q9BWH6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RPAP1Q9BWH6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 AC112191.1-201ENST00000523689 701 ntBASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPAP1Q9BWH6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 AC078925.2-201ENST00000624013 1973 ntBASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 MIR770-201ENST00000390219 98 ntBASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 SPCS2P1-201ENST00000561636 679 ntBASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.42■□□□□ 0.86
RPAP1Q9BWH6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 AC011467.4-201ENST00000594891 528 ntBASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPAP1Q9BWH6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPAP1Q9BWH6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms