Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ARID3AQ99856 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.33■□□□□ 0.68
ARID3AQ99856 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.33■□□□□ 0.68
ARID3AQ99856 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ARID3AQ99856 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ARID3AQ99856 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.33■□□□□ 0.68
ARID3AQ99856 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.33■□□□□ 0.68
ARID3AQ99856 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.33■□□□□ 0.68
ARID3AQ99856 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.33■□□□□ 0.68
ARID3AQ99856 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.33■□□□□ 0.68
ARID3AQ99856 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ARID3AQ99856 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ARID3AQ99856 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARID3AQ99856 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
ARID3AQ99856 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC19.32■□□□□ 0.68
ARID3AQ99856 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ARID3AQ99856 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.32■□□□□ 0.68
ARID3AQ99856 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ARID3AQ99856 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.32■□□□□ 0.68
ARID3AQ99856 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 AL603756.1-201ENST00000606511 2163 ntBASIC19.32■□□□□ 0.68
ARID3AQ99856 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ARID3AQ99856 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.32■□□□□ 0.68
ARID3AQ99856 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.32■□□□□ 0.68
ARID3AQ99856 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.32■□□□□ 0.68
ARID3AQ99856 AC011498.5-201ENST00000592027 486 ntBASIC19.32■□□□□ 0.68
ARID3AQ99856 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.32■□□□□ 0.68
ARID3AQ99856 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
ARID3AQ99856 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.32■□□□□ 0.68
ARID3AQ99856 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ARID3AQ99856 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.32■□□□□ 0.68
ARID3AQ99856 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARID3AQ99856 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.32■□□□□ 0.68
ARID3AQ99856 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ARID3AQ99856 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ARID3AQ99856 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.31■□□□□ 0.68
ARID3AQ99856 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ARID3AQ99856 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.31■□□□□ 0.68
ARID3AQ99856 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ARID3AQ99856 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.31■□□□□ 0.68
ARID3AQ99856 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.31■□□□□ 0.68
ARID3AQ99856 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 DUTP2-201ENST00000519164 463 ntBASIC19.31■□□□□ 0.68
ARID3AQ99856 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.31■□□□□ 0.68
ARID3AQ99856 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.31■□□□□ 0.68
ARID3AQ99856 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
ARID3AQ99856 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.31■□□□□ 0.68
ARID3AQ99856 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.31■□□□□ 0.68
ARID3AQ99856 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ARID3AQ99856 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.31■□□□□ 0.68
ARID3AQ99856 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.31■□□□□ 0.68
ARID3AQ99856 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARID3AQ99856 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.31■□□□□ 0.68
ARID3AQ99856 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARID3AQ99856 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms