Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 FLJ38576-201ENST00000623820 2459 ntBASIC16.45■□□□□ 0.22
PKP4Q99569 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.45■□□□□ 0.22
PKP4Q99569 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.45■□□□□ 0.22
PKP4Q99569 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PKP4Q99569 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PKP4Q99569 AC129492.6-201ENST00000611383 1305 ntBASIC16.45■□□□□ 0.22
PKP4Q99569 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.44■□□□□ 0.22
PKP4Q99569 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PKP4Q99569 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.44■□□□□ 0.22
PKP4Q99569 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.44■□□□□ 0.22
PKP4Q99569 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.44■□□□□ 0.22
PKP4Q99569 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PKP4Q99569 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
PKP4Q99569 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
PKP4Q99569 PRSS29P-201ENST00000440800 595 ntBASIC16.44■□□□□ 0.22
PKP4Q99569 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PKP4Q99569 AP002490.2-201ENST00000524791 560 ntBASIC16.44■□□□□ 0.22
PKP4Q99569 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.44■□□□□ 0.22
PKP4Q99569 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.44■□□□□ 0.22
PKP4Q99569 Z83851.2-201ENST00000609564 659 ntBASIC16.44■□□□□ 0.22
PKP4Q99569 AC010654.1-201ENST00000615722 808 ntBASIC16.44■□□□□ 0.22
PKP4Q99569 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.44■□□□□ 0.22
PKP4Q99569 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 AC104109.2-201ENST00000602919 1418 ntBASIC16.44■□□□□ 0.22
PKP4Q99569 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.44■□□□□ 0.22
PKP4Q99569 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.44■□□□□ 0.22
PKP4Q99569 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PKP4Q99569 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.43■□□□□ 0.22
PKP4Q99569 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.43■□□□□ 0.22
PKP4Q99569 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PKP4Q99569 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PKP4Q99569 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PKP4Q99569 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PKP4Q99569 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.43■□□□□ 0.22
PKP4Q99569 VN2R19P-201ENST00000442399 1052 ntBASIC16.43■□□□□ 0.22
PKP4Q99569 RPL13AP23-201ENST00000480739 586 ntBASIC16.43■□□□□ 0.22
PKP4Q99569 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.43■□□□□ 0.22
PKP4Q99569 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.43■□□□□ 0.22
PKP4Q99569 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.43■□□□□ 0.22
PKP4Q99569 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.43■□□□□ 0.22
PKP4Q99569 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.43■□□□□ 0.22
PKP4Q99569 MPDU1-223ENST00000582151 728 ntBASIC16.43■□□□□ 0.22
PKP4Q99569 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
PKP4Q99569 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PKP4Q99569 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.43■□□□□ 0.22
PKP4Q99569 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
PKP4Q99569 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.43■□□□□ 0.22
PKP4Q99569 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.43■□□□□ 0.22
PKP4Q99569 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PKP4Q99569 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PKP4Q99569 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.42■□□□□ 0.22
PKP4Q99569 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PKP4Q99569 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.42■□□□□ 0.22
PKP4Q99569 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.42■□□□□ 0.22
PKP4Q99569 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.42■□□□□ 0.22
PKP4Q99569 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.42■□□□□ 0.22
PKP4Q99569 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.42■□□□□ 0.22
PKP4Q99569 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.42■□□□□ 0.22
PKP4Q99569 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 LINC00895-201ENST00000629028 1637 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms