Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 AC079781.3-201ENST00000449110 356 ntBASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 HLA-J-202ENST00000469281 1241 ntBASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 AC105339.3-201ENST00000560043 636 ntBASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 AL356488.2-201ENST00000602755 427 ntBASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 PGM5P2-202ENST00000637225 1043 ntBASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.77■□□□□ 0.12
MS4A4EQ96PG1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
MS4A4EQ96PG1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 SLC25A6P2-201ENST00000497974 877 ntBASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 AC008667.4-201ENST00000607370 168 ntBASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 AL031008.1-201ENST00000619963 541 ntBASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 REXO1L3P-201ENST00000622202 1288 ntBASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MS4A4EQ96PG1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 HNRNPDP1-201ENST00000439535 754 ntBASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 KRT126P-201ENST00000549467 1181 ntBASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 AC091167.2-201ENST00000579581 588 ntBASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 AC005593.1-201ENST00000624894 515 ntBASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 AL139011.1-202ENST00000642063 584 ntBASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms