Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CPEB3Q8NE35 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 SLC25A6P2-201ENST00000497974 877 ntBASIC14.8□□□□□ -0.04
CPEB3Q8NE35 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 AC002310.6-201ENST00000624451 1377 ntBASIC14.8□□□□□ -0.04
CPEB3Q8NE35 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 RNF216P1-203ENST00000404404 2427 ntBASIC14.8□□□□□ -0.04
CPEB3Q8NE35 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.8□□□□□ -0.04
CPEB3Q8NE35 NKILA-202ENST00000614771 2598 ntBASIC14.8□□□□□ -0.04
CPEB3Q8NE35 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 TUBB8P12-201ENST00000308911 1335 ntBASIC14.79□□□□□ -0.04
CPEB3Q8NE35 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 TUBB7P-202ENST00000428444 1305 ntBASIC14.79□□□□□ -0.04
CPEB3Q8NE35 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 IGHV3-22-201ENST00000520721 359 ntBASIC14.79□□□□□ -0.04
CPEB3Q8NE35 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 TUBB8P7-204ENST00000567960 1332 ntBASIC14.79□□□□□ -0.04
CPEB3Q8NE35 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 AL021920.2-201ENST00000624828 1351 ntBASIC14.79□□□□□ -0.04
CPEB3Q8NE35 AC011676.5-201ENST00000624864 2660 ntBASIC14.79□□□□□ -0.04
CPEB3Q8NE35 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
CPEB3Q8NE35 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPEB3Q8NE35 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms