Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.6■□□□□ 0.41
RFX6Q8HWS3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 HLA-A-202ENST00000376806 1854 ntBASIC17.6■□□□□ 0.41
RFX6Q8HWS3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 CLEC4GP1-201ENST00000596555 870 ntBASIC17.59■□□□□ 0.41
RFX6Q8HWS3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.59■□□□□ 0.41
RFX6Q8HWS3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX6Q8HWS3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 KRT8P49-201ENST00000604166 1432 ntBASIC17.58■□□□□ 0.41
RFX6Q8HWS3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RFX6Q8HWS3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 SAPCD2P3-201ENST00000455031 850 ntBASIC17.58■□□□□ 0.4
RFX6Q8HWS3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.58■□□□□ 0.4
RFX6Q8HWS3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX6Q8HWS3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms