Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 AL596275.1-201ENST00000423464 877 ntBASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 TSPY22P-201ENST00000427496 604 ntBASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 AC083849.1-201ENST00000615227 514 ntBASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LRRTM1Q86UE6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM1Q86UE6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM1Q86UE6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM1Q86UE6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM1Q86UE6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM1Q86UE6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.71□□□□□ -0.06
LRRTM1Q86UE6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LRRTM1Q86UE6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 NUS1P1-201ENST00000446295 882 ntBASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 AC009533.2-201ENST00000543664 586 ntBASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 AC011467.2-201ENST00000598425 242 ntBASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 AC005363.2-201ENST00000618631 242 ntBASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM1Q86UE6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms