Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 AC005336.2-201ENST00000593183 939 ntBASIC15.33■□□□□ 0.04
SHFQ7M4L6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 GPR89P-201ENST00000407924 1495 ntBASIC15.33■□□□□ 0.04
SHFQ7M4L6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.33■□□□□ 0.04
SHFQ7M4L6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 STK19B-204ENST00000512515 211 ntBASIC15.32■□□□□ 0.04
SHFQ7M4L6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.32■□□□□ 0.04
SHFQ7M4L6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 AL353593.2-201ENST00000602529 1483 ntBASIC15.32■□□□□ 0.04
SHFQ7M4L6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHFQ7M4L6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.32■□□□□ 0.04
SHFQ7M4L6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 AL845331.1-201ENST00000424978 1190 ntBASIC15.31■□□□□ 0.04
SHFQ7M4L6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHFQ7M4L6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.31■□□□□ 0.04
SHFQ7M4L6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms