Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC002310.6-201ENST00000624451 1377 ntBASIC20.19■□□□□ 0.82
RNF20Q5VTR2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 AC006277.1-201ENST00000624348 1610 ntBASIC20.18■□□□□ 0.82
RNF20Q5VTR2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 AC105339.3-201ENST00000560043 636 ntBASIC20.18■□□□□ 0.82
RNF20Q5VTR2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF20Q5VTR2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 HLA-A-202ENST00000376806 1854 ntBASIC20.17■□□□□ 0.82
RNF20Q5VTR2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF20Q5VTR2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 HNRNPDP1-201ENST00000439535 754 ntBASIC20.16■□□□□ 0.82
RNF20Q5VTR2 HLA-J-202ENST00000469281 1241 ntBASIC20.16■□□□□ 0.82
RNF20Q5VTR2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 AL356488.2-201ENST00000602755 427 ntBASIC20.16■□□□□ 0.82
RNF20Q5VTR2 AC008667.4-201ENST00000607370 168 ntBASIC20.16■□□□□ 0.82
RNF20Q5VTR2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 REXO1L3P-201ENST00000622202 1288 ntBASIC20.16■□□□□ 0.82
RNF20Q5VTR2 AL139011.1-202ENST00000642063 584 ntBASIC20.16■□□□□ 0.82
RNF20Q5VTR2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF20Q5VTR2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF20Q5VTR2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms