Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 AC096582.2-201ENST00000510860 516 ntBASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 AL513523.2-202ENST00000427283 2040 ntBASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ATPAF1Q5TC12 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 AC092053.1-201ENST00000605787 1936 ntBASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 MYCLP1-201ENST00000372451 1075 ntBASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 TSPY19P-201ENST00000418461 509 ntBASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 TSPY18P-201ENST00000441642 509 ntBASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 FOSL1P1-201ENST00000511041 816 ntBASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATPAF1Q5TC12 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 AL662844.4-201ENST00000606367 2838 ntBASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 PRELID1P1-202ENST00000567272 903 ntBASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 CLEC4GP1-201ENST00000596555 870 ntBASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 AL591684.3-201ENST00000605187 298 ntBASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 AD001527.2-201ENST00000622994 785 ntBASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 AL049757.1-201ENST00000616842 1596 ntBASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ATPAF1Q5TC12 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATPAF1Q5TC12 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms