Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 FAM197Y1-201ENST00000421178 764 ntBASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 AF186192.3-201ENST00000583427 947 ntBASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 AC145285.6-201ENST00000604632 637 ntBASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 PPT1-215ENST00000641471 2368 ntBASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 FSCN1P1-201ENST00000568912 1481 ntBASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 AC063926.3-201ENST00000624734 5658 ntBASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CCDC173Q0VFZ6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 MESTP1-201ENST00000404287 994 ntBASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 AP002414.2-201ENST00000591780 3365 ntBASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 AC023157.3-201ENST00000619086 2088 ntBASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 AC138035.3-201ENST00000622706 2791 ntBASIC19.15■□□□□ 0.66
CCDC173Q0VFZ6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC173Q0VFZ6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CCDC173Q0VFZ6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC173Q0VFZ6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms