Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 AC122714.2-201ENST00000502787 707 ntBASIC13.01□□□□□ -0.33
HIST1H1AQ02539 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 AC087388.1-201ENST00000571370 1112 ntBASIC13.01□□□□□ -0.33
HIST1H1AQ02539 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 AC026691.1-201ENST00000602502 2017 ntBASIC13.01□□□□□ -0.33
HIST1H1AQ02539 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1AQ02539 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HIST1H1AQ02539 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
HIST1H1AQ02539 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1AQ02539 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13□□□□□ -0.33
HIST1H1AQ02539 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1AQ02539 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 KRT18P1-202ENST00000452408 1331 ntBASIC13□□□□□ -0.33
HIST1H1AQ02539 AC005332.1-201ENST00000577698 1310 ntBASIC13□□□□□ -0.33
HIST1H1AQ02539 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
HIST1H1AQ02539 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H1AQ02539 AL031133.1-201ENST00000406807 723 ntBASIC13□□□□□ -0.33
HIST1H1AQ02539 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
HIST1H1AQ02539 AL845331.1-201ENST00000424978 1190 ntBASIC13□□□□□ -0.33
HIST1H1AQ02539 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H1AQ02539 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H1AQ02539 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H1AQ02539 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1AQ02539 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1AQ02539 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13□□□□□ -0.33
HIST1H1AQ02539 ABR-217ENST00000572441 563 ntTSL 4 BASIC13□□□□□ -0.33
HIST1H1AQ02539 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H1AQ02539 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1AQ02539 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H1AQ02539 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
HIST1H1AQ02539 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1AQ02539 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H1AQ02539 AC246785.2-201ENST00000432512 513 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms