Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN7AQ01118 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
SCN7AQ01118 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCN7AQ01118 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN7AQ01118 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.72■□□□□ 0.91
SCN7AQ01118 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN7AQ01118 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SCN7AQ01118 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN7AQ01118 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN7AQ01118 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SCN7AQ01118 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN7AQ01118 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SCN7AQ01118 AC044860.1-202ENST00000559481 777 ntBASIC20.71■□□□□ 0.91
SCN7AQ01118 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.71■□□□□ 0.91
SCN7AQ01118 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN7AQ01118 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN7AQ01118 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN7AQ01118 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN7AQ01118 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SCN7AQ01118 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN7AQ01118 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN7AQ01118 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN7AQ01118 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN7AQ01118 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN7AQ01118 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SCN7AQ01118 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN7AQ01118 AC092053.1-201ENST00000605787 1936 ntBASIC20.71■□□□□ 0.91
SCN7AQ01118 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN7AQ01118 AC134043.2-201ENST00000624206 2238 ntBASIC20.71■□□□□ 0.91
SCN7AQ01118 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SCN7AQ01118 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
SCN7AQ01118 SPDYE19P-201ENST00000338590 713 ntBASIC20.7■□□□□ 0.91
SCN7AQ01118 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
SCN7AQ01118 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.91
SCN7AQ01118 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SCN7AQ01118 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.7■□□□□ 0.91
SCN7AQ01118 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SCN7AQ01118 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
SCN7AQ01118 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.7■□□□□ 0.91
SCN7AQ01118 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.7■□□□□ 0.91
SCN7AQ01118 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.7■□□□□ 0.91
SCN7AQ01118 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SCN7AQ01118 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
SCN7AQ01118 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN7AQ01118 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN7AQ01118 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN7AQ01118 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 GGT4P-201ENST00000623672 1708 ntBASIC20.7■□□□□ 0.9
SCN7AQ01118 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN7AQ01118 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
SCN7AQ01118 AL512384.1-201ENST00000406683 331 ntBASIC20.7■□□□□ 0.9
SCN7AQ01118 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SCN7AQ01118 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.7■□□□□ 0.9
SCN7AQ01118 SERBP1P3-201ENST00000459980 809 ntBASIC20.7■□□□□ 0.9
SCN7AQ01118 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN7AQ01118 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SCN7AQ01118 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCN7AQ01118 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SCN7AQ01118 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN7AQ01118 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN7AQ01118 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN7AQ01118 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN7AQ01118 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SCN7AQ01118 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN7AQ01118 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN7AQ01118 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN7AQ01118 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SCN7AQ01118 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN7AQ01118 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.69■□□□□ 0.9
SCN7AQ01118 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCN7AQ01118 GNAQP1-201ENST00000444815 1067 ntBASIC20.69■□□□□ 0.9
SCN7AQ01118 AC119751.2-201ENST00000504529 210 ntBASIC20.69■□□□□ 0.9
SCN7AQ01118 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN7AQ01118 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.69■□□□□ 0.9
SCN7AQ01118 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN7AQ01118 AC024267.1-201ENST00000582320 895 ntBASIC20.69■□□□□ 0.9
SCN7AQ01118 AC099568.2-201ENST00000609194 695 ntBASIC20.69■□□□□ 0.9
SCN7AQ01118 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN7AQ01118 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN7AQ01118 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN7AQ01118 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN7AQ01118 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN7AQ01118 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN7AQ01118 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SCN7AQ01118 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SCN7AQ01118 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms