Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CXCR4P61073 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.44■□□□□ 0.06
CXCR4P61073 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.44■□□□□ 0.06
CXCR4P61073 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.44■□□□□ 0.06
CXCR4P61073 AC144831.1-201ENST00000573312 2656 ntBASIC15.44■□□□□ 0.06
CXCR4P61073 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 AL135999.2-201ENST00000622438 1686 ntBASIC15.44■□□□□ 0.06
CXCR4P61073 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.44■□□□□ 0.06
CXCR4P61073 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.44■□□□□ 0.06
CXCR4P61073 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.44■□□□□ 0.06
CXCR4P61073 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.43■□□□□ 0.06
CXCR4P61073 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.43■□□□□ 0.06
CXCR4P61073 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.43■□□□□ 0.06
CXCR4P61073 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 HBZP1-201ENST00000354915 429 ntBASIC15.43■□□□□ 0.06
CXCR4P61073 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CXCR4P61073 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.43■□□□□ 0.06
CXCR4P61073 BX664615.1-201ENST00000443558 458 ntBASIC15.43■□□□□ 0.06
CXCR4P61073 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.43■□□□□ 0.06
CXCR4P61073 AC111152.3-201ENST00000569699 673 ntBASIC15.43■□□□□ 0.06
CXCR4P61073 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.43■□□□□ 0.06
CXCR4P61073 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CXCR4P61073 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.43■□□□□ 0.06
CXCR4P61073 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.43■□□□□ 0.06
CXCR4P61073 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CXCR4P61073 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.43■□□□□ 0.06
CXCR4P61073 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.43■□□□□ 0.06
CXCR4P61073 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CXCR4P61073 DBET-201ENST00000630918 3363 ntBASIC15.42■□□□□ 0.06
CXCR4P61073 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.42■□□□□ 0.06
CXCR4P61073 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.42■□□□□ 0.06
CXCR4P61073 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 AL049757.1-201ENST00000616842 1596 ntBASIC15.42■□□□□ 0.06
CXCR4P61073 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.42■□□□□ 0.06
CXCR4P61073 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.42■□□□□ 0.06
CXCR4P61073 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CXCR4P61073 AL137013.1-201ENST00000432946 1228 ntBASIC15.42■□□□□ 0.06
CXCR4P61073 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.42■□□□□ 0.06
CXCR4P61073 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.42■□□□□ 0.06
CXCR4P61073 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.42■□□□□ 0.06
CXCR4P61073 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
CXCR4P61073 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.42■□□□□ 0.06
CXCR4P61073 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.42■□□□□ 0.06
CXCR4P61073 STK25P1-201ENST00000585406 838 ntBASIC15.42■□□□□ 0.06
CXCR4P61073 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.42■□□□□ 0.06
CXCR4P61073 AL139011.1-202ENST00000642063 584 ntBASIC15.42■□□□□ 0.06
CXCR4P61073 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.42■□□□□ 0.06
CXCR4P61073 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CXCR4P61073 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.42■□□□□ 0.06
CXCR4P61073 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CXCR4P61073 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CXCR4P61073 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CXCR4P61073 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CXCR4P61073 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CXCR4P61073 AP005117.1-202ENST00000581724 1908 ntBASIC15.41■□□□□ 0.06
CXCR4P61073 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.41■□□□□ 0.06
CXCR4P61073 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CXCR4P61073 AC113347.1-201ENST00000413321 391 ntBASIC15.41■□□□□ 0.06
CXCR4P61073 AC117947.1-201ENST00000427448 529 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms