Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATN1P54259 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATN1P54259 AP000568.1-201ENST00000282964 442 ntBASIC18.51■□□□□ 0.55
ATN1P54259 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATN1P54259 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATN1P54259 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATN1P54259 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 AL353705.2-201ENST00000428243 662 ntBASIC18.51■□□□□ 0.55
ATN1P54259 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.51■□□□□ 0.55
ATN1P54259 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATN1P54259 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC18.51■□□□□ 0.55
ATN1P54259 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.51■□□□□ 0.55
ATN1P54259 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.51■□□□□ 0.55
ATN1P54259 RAB43P1-201ENST00000561790 589 ntBASIC18.51■□□□□ 0.55
ATN1P54259 WASH4P-201ENST00000564273 1246 ntBASIC18.51■□□□□ 0.55
ATN1P54259 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.51■□□□□ 0.55
ATN1P54259 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATN1P54259 AL035456.1-201ENST00000456064 1369 ntBASIC18.51■□□□□ 0.55
ATN1P54259 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.51■□□□□ 0.55
ATN1P54259 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.51■□□□□ 0.55
ATN1P54259 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.51■□□□□ 0.55
ATN1P54259 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATN1P54259 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.5■□□□□ 0.55
ATN1P54259 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.5■□□□□ 0.55
ATN1P54259 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.5■□□□□ 0.55
ATN1P54259 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.5■□□□□ 0.55
ATN1P54259 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.5■□□□□ 0.55
ATN1P54259 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.5■□□□□ 0.55
ATN1P54259 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATN1P54259 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.5■□□□□ 0.55
ATN1P54259 KRT18P34-201ENST00000488218 1270 ntBASIC18.5■□□□□ 0.55
ATN1P54259 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATN1P54259 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.5■□□□□ 0.55
ATN1P54259 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.5■□□□□ 0.55
ATN1P54259 CHCHD2P3-201ENST00000603038 451 ntBASIC18.5■□□□□ 0.55
ATN1P54259 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC18.5■□□□□ 0.55
ATN1P54259 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATN1P54259 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATN1P54259 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATN1P54259 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.5■□□□□ 0.55
ATN1P54259 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATN1P54259 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATN1P54259 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ATN1P54259 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.49■□□□□ 0.55
ATN1P54259 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.49■□□□□ 0.55
ATN1P54259 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 LINC00896-202ENST00000609602 2128 ntBASIC18.49■□□□□ 0.55
ATN1P54259 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ATN1P54259 HLA-H-201ENST00000383620 1096 ntBASIC18.49■□□□□ 0.55
ATN1P54259 AC010740.1-201ENST00000417035 684 ntBASIC18.49■□□□□ 0.55
ATN1P54259 DFFBP1-201ENST00000433250 979 ntBASIC18.49■□□□□ 0.55
ATN1P54259 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC18.49■□□□□ 0.55
ATN1P54259 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.49■□□□□ 0.55
ATN1P54259 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.49■□□□□ 0.55
ATN1P54259 AC073389.1-201ENST00000595595 795 ntBASIC18.49■□□□□ 0.55
ATN1P54259 RN7SL828P-201ENST00000607615 303 ntBASIC18.49■□□□□ 0.55
ATN1P54259 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.49■□□□□ 0.55
ATN1P54259 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.49■□□□□ 0.55
ATN1P54259 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.49■□□□□ 0.55
ATN1P54259 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 FOXO1B-201ENST00000504678 1527 ntBASIC18.49■□□□□ 0.55
ATN1P54259 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.49■□□□□ 0.55
ATN1P54259 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.49■□□□□ 0.55
ATN1P54259 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATN1P54259 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 LINC00304-203ENST00000565008 1864 ntBASIC18.48■□□□□ 0.55
ATN1P54259 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
ATN1P54259 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.48■□□□□ 0.55
ATN1P54259 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATN1P54259 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 SPDYE19P-201ENST00000338590 713 ntBASIC18.48■□□□□ 0.55
ATN1P54259 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
ATN1P54259 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATN1P54259 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms