Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCK1P35558 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
PCK1P35558 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.83■□□□□ 0.44
PCK1P35558 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.83■□□□□ 0.44
PCK1P35558 AF238378.1-201ENST00000526806 358 ntBASIC17.83■□□□□ 0.44
PCK1P35558 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.83■□□□□ 0.44
PCK1P35558 AC139887.3-201ENST00000568585 713 ntBASIC17.83■□□□□ 0.44
PCK1P35558 MTDHP4-201ENST00000600287 670 ntBASIC17.83■□□□□ 0.44
PCK1P35558 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCK1P35558 AC012313.10-201ENST00000623509 926 ntBASIC17.83■□□□□ 0.44
PCK1P35558 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PCK1P35558 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.83■□□□□ 0.44
PCK1P35558 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCK1P35558 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.82■□□□□ 0.44
PCK1P35558 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.82■□□□□ 0.44
PCK1P35558 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.82■□□□□ 0.44
PCK1P35558 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PCK1P35558 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.82■□□□□ 0.44
PCK1P35558 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.82■□□□□ 0.44
PCK1P35558 TERC-201ENST00000602385 541 ntBASIC17.82■□□□□ 0.44
PCK1P35558 IFNL4P1-201ENST00000607083 540 ntBASIC17.82■□□□□ 0.44
PCK1P35558 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
PCK1P35558 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.82■□□□□ 0.44
PCK1P35558 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCK1P35558 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCK1P35558 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCK1P35558 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.82■□□□□ 0.44
PCK1P35558 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCK1P35558 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCK1P35558 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCK1P35558 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.81■□□□□ 0.44
PCK1P35558 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCK1P35558 AP002490.2-201ENST00000524791 560 ntBASIC17.81■□□□□ 0.44
PCK1P35558 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.81■□□□□ 0.44
PCK1P35558 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.81■□□□□ 0.44
PCK1P35558 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.81■□□□□ 0.44
PCK1P35558 AC025062.2-201ENST00000605477 670 ntBASIC17.81■□□□□ 0.44
PCK1P35558 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCK1P35558 AC004706.3-202ENST00000621574 984 ntBASIC17.81■□□□□ 0.44
PCK1P35558 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCK1P35558 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCK1P35558 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCK1P35558 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms