Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPA3P35244 FAM220CP-201ENST00000395253 831 ntBASIC17.12■□□□□ 0.33
RPA3P35244 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 KRT18P56-201ENST00000507275 550 ntBASIC17.12■□□□□ 0.33
RPA3P35244 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.12■□□□□ 0.33
RPA3P35244 PRELID1P1-202ENST00000567272 903 ntBASIC17.12■□□□□ 0.33
RPA3P35244 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.12■□□□□ 0.33
RPA3P35244 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 AL365203.3-201ENST00000609742 2057 ntBASIC17.12■□□□□ 0.33
RPA3P35244 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.12■□□□□ 0.33
RPA3P35244 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RPA3P35244 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.11■□□□□ 0.33
RPA3P35244 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.11■□□□□ 0.33
RPA3P35244 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.11■□□□□ 0.33
RPA3P35244 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.11■□□□□ 0.33
RPA3P35244 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 AL135999.2-201ENST00000622438 1686 ntBASIC17.11■□□□□ 0.33
RPA3P35244 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RPA3P35244 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.11■□□□□ 0.33
RPA3P35244 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 NUS1P2-201ENST00000417358 873 ntBASIC17.11■□□□□ 0.33
RPA3P35244 POM121L3P-201ENST00000419331 1163 ntBASIC17.11■□□□□ 0.33
RPA3P35244 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.11■□□□□ 0.33
RPA3P35244 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.11■□□□□ 0.33
RPA3P35244 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.11■□□□□ 0.33
RPA3P35244 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.11■□□□□ 0.33
RPA3P35244 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.11■□□□□ 0.33
RPA3P35244 BNIP3P18-201ENST00000593976 575 ntBASIC17.11■□□□□ 0.33
RPA3P35244 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RPA3P35244 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPA3P35244 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.11■□□□□ 0.33
RPA3P35244 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPA3P35244 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.11■□□□□ 0.33
RPA3P35244 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
RPA3P35244 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
RPA3P35244 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.1■□□□□ 0.33
RPA3P35244 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPA3P35244 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.1■□□□□ 0.33
RPA3P35244 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RPA3P35244 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.1■□□□□ 0.33
RPA3P35244 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPA3P35244 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPA3P35244 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPA3P35244 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RPA3P35244 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPA3P35244 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.1■□□□□ 0.33
RPA3P35244 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RPA3P35244 FOSL1P1-201ENST00000511041 816 ntBASIC17.1■□□□□ 0.33
RPA3P35244 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.1■□□□□ 0.33
RPA3P35244 AC011467.2-201ENST00000598425 242 ntBASIC17.1■□□□□ 0.33
RPA3P35244 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPA3P35244 KRT8P10-201ENST00000450021 1447 ntBASIC17.1■□□□□ 0.33
RPA3P35244 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPA3P35244 GPR89P-201ENST00000407924 1495 ntBASIC17.1■□□□□ 0.33
RPA3P35244 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPA3P35244 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPA3P35244 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPA3P35244 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms