Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
PTPN7P35236 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PTPN7P35236 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN7P35236 PTCHD3P3-201ENST00000403073 906 ntBASIC17.46■□□□□ 0.39
PTPN7P35236 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN7P35236 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.46■□□□□ 0.39
PTPN7P35236 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN7P35236 SCARNA2-201ENST00000458748 420 ntBASIC17.46■□□□□ 0.39
PTPN7P35236 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN7P35236 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.46■□□□□ 0.39
PTPN7P35236 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN7P35236 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN7P35236 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.46■□□□□ 0.39
PTPN7P35236 AC025062.2-201ENST00000605477 670 ntBASIC17.46■□□□□ 0.39
PTPN7P35236 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN7P35236 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.46■□□□□ 0.39
PTPN7P35236 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN7P35236 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.46■□□□□ 0.38
PTPN7P35236 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
PTPN7P35236 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
PTPN7P35236 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.46■□□□□ 0.38
PTPN7P35236 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 AKR1C7P-201ENST00000305623 895 ntBASIC17.45■□□□□ 0.38
PTPN7P35236 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.45■□□□□ 0.38
PTPN7P35236 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPN7P35236 MIR1224-201ENST00000408193 85 ntBASIC17.45■□□□□ 0.38
PTPN7P35236 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.45■□□□□ 0.38
PTPN7P35236 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPN7P35236 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN7P35236 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPN7P35236 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.45■□□□□ 0.38
PTPN7P35236 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTPN7P35236 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN7P35236 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN7P35236 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN7P35236 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPN7P35236 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN7P35236 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN7P35236 LAGE3P1-201ENST00000425356 484 ntBASIC17.44■□□□□ 0.38
PTPN7P35236 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPN7P35236 SAPCD2P3-201ENST00000455031 850 ntBASIC17.44■□□□□ 0.38
PTPN7P35236 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN7P35236 AC091304.2-201ENST00000564639 760 ntBASIC17.44■□□□□ 0.38
PTPN7P35236 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN7P35236 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPN7P35236 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPN7P35236 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTPN7P35236 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN7P35236 KRT8P39-201ENST00000396270 1433 ntBASIC17.44■□□□□ 0.38
PTPN7P35236 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN7P35236 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN7P35236 AL512652.2-201ENST00000625156 1716 ntBASIC17.44■□□□□ 0.38
PTPN7P35236 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN7P35236 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN7P35236 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN7P35236 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN7P35236 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN7P35236 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN7P35236 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms