Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.21□□□□□ -0.13
LMO1P25800 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LMO1P25800 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 AC107918.4-202ENST00000641623 219 ntBASIC14.21□□□□□ -0.13
LMO1P25800 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LMO1P25800 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LMO1P25800 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.21□□□□□ -0.13
LMO1P25800 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.21□□□□□ -0.13
LMO1P25800 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.21□□□□□ -0.13
LMO1P25800 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.21□□□□□ -0.14
LMO1P25800 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LMO1P25800 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LMO1P25800 TOP3BP1-201ENST00000420768 1380 ntBASIC14.21□□□□□ -0.14
LMO1P25800 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.21□□□□□ -0.14
LMO1P25800 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
LMO1P25800 AL391256.1-201ENST00000443260 1855 ntBASIC14.21□□□□□ -0.14
LMO1P25800 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO1P25800 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO1P25800 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO1P25800 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.2□□□□□ -0.14
LMO1P25800 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO1P25800 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO1P25800 AC006557.2-201ENST00000592985 1240 ntBASIC14.2□□□□□ -0.14
LMO1P25800 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO1P25800 IFNL4P1-201ENST00000607083 540 ntBASIC14.2□□□□□ -0.14
LMO1P25800 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LMO1P25800 AL139011.1-202ENST00000642063 584 ntBASIC14.2□□□□□ -0.14
LMO1P25800 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
LMO1P25800 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LMO1P25800 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO1P25800 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LMO1P25800 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO1P25800 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
LMO1P25800 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LMO1P25800 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
LMO1P25800 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO1P25800 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO1P25800 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO1P25800 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
LMO1P25800 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
LMO1P25800 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
LMO1P25800 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 PTCHD3P3-201ENST00000403073 906 ntBASIC14.19□□□□□ -0.14
LMO1P25800 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 HLA-J-202ENST00000469281 1241 ntBASIC14.19□□□□□ -0.14
LMO1P25800 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.19□□□□□ -0.14
LMO1P25800 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO1P25800 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LMO1P25800 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.19□□□□□ -0.14
LMO1P25800 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LMO1P25800 AL805961.1-202ENST00000641562 540 ntBASIC14.19□□□□□ -0.14
LMO1P25800 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO1P25800 AC105917.1-201ENST00000506637 2539 ntBASIC14.19□□□□□ -0.14
LMO1P25800 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms