Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.98■□□□□ 0.31
CTPS1P17812 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS1P17812 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS1P17812 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS1P17812 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS1P17812 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CTPS1P17812 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.98■□□□□ 0.31
CTPS1P17812 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTPS1P17812 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.98■□□□□ 0.31
CTPS1P17812 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.97■□□□□ 0.31
CTPS1P17812 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS1P17812 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS1P17812 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CTPS1P17812 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTPS1P17812 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
CTPS1P17812 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CTPS1P17812 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTPS1P17812 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.97■□□□□ 0.31
CTPS1P17812 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.97■□□□□ 0.31
CTPS1P17812 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.97■□□□□ 0.31
CTPS1P17812 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 SLC22A20-204ENST00000530038 1673 ntBASIC16.97■□□□□ 0.31
CTPS1P17812 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTPS1P17812 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.97■□□□□ 0.31
CTPS1P17812 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.96■□□□□ 0.31
CTPS1P17812 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 PMS2P7-201ENST00000506558 1336 ntBASIC16.96■□□□□ 0.31
CTPS1P17812 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS1P17812 AC025580.3-201ENST00000617932 1424 ntBASIC16.96■□□□□ 0.31
CTPS1P17812 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS1P17812 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.96■□□□□ 0.31
CTPS1P17812 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
CTPS1P17812 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS1P17812 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CTPS1P17812 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS1P17812 RHOQP3-201ENST00000437982 621 ntBASIC16.96■□□□□ 0.31
CTPS1P17812 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTPS1P17812 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTPS1P17812 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS1P17812 PGAM5P1-201ENST00000518923 814 ntBASIC16.96■□□□□ 0.31
CTPS1P17812 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CTPS1P17812 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.96■□□□□ 0.31
CTPS1P17812 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.96■□□□□ 0.31
CTPS1P17812 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.96■□□□□ 0.31
CTPS1P17812 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTPS1P17812 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTPS1P17812 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTPS1P17812 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTPS1P17812 RNF216P1-203ENST00000404404 2427 ntBASIC16.96■□□□□ 0.3
CTPS1P17812 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTPS1P17812 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTPS1P17812 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.96■□□□□ 0.3
CTPS1P17812 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTPS1P17812 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS1P17812 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms