Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL3L1P16619 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
CCL3L1P16619 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL3L1P16619 ZNF259P1-201ENST00000407656 1365 ntBASIC13.95□□□□□ -0.18
CCL3L1P16619 TOP3BP1-201ENST00000420768 1380 ntBASIC13.95□□□□□ -0.18
CCL3L1P16619 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL3L1P16619 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL3L1P16619 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.94□□□□□ -0.18
CCL3L1P16619 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CCL3L1P16619 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL3L1P16619 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL3L1P16619 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL3L1P16619 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 PRSS29P-201ENST00000440800 595 ntBASIC13.94□□□□□ -0.18
CCL3L1P16619 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.94□□□□□ -0.18
CCL3L1P16619 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL3L1P16619 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL3L1P16619 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 AC106730.1-201ENST00000566722 1090 ntBASIC13.94□□□□□ -0.18
CCL3L1P16619 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL3L1P16619 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL3L1P16619 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CCL3L1P16619 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
CCL3L1P16619 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CCL3L1P16619 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCL3L1P16619 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL3L1P16619 AC009053.2-201ENST00000563701 2365 ntBASIC13.94□□□□□ -0.18
CCL3L1P16619 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCL3L1P16619 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCL3L1P16619 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL3L1P16619 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CCL3L1P16619 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 NKILA-202ENST00000614771 2598 ntBASIC13.93□□□□□ -0.18
CCL3L1P16619 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
CCL3L1P16619 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL3L1P16619 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL3L1P16619 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL3L1P16619 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CCL3L1P16619 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL3L1P16619 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL3L1P16619 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCL3L1P16619 IGLL3P-201ENST00000412472 434 ntBASIC13.93□□□□□ -0.18
CCL3L1P16619 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL3L1P16619 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL3L1P16619 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.93□□□□□ -0.18
CCL3L1P16619 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 AC064836.3-201ENST00000607928 673 ntBASIC13.93□□□□□ -0.18
CCL3L1P16619 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 AC079328.2-201ENST00000561241 3354 ntBASIC13.93□□□□□ -0.18
CCL3L1P16619 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL3L1P16619 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 AC011676.5-201ENST00000624864 2660 ntBASIC13.93□□□□□ -0.18
CCL3L1P16619 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL3L1P16619 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCL3L1P16619 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms