Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2A2P16615 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP2A2P16615 AC099522.2-201ENST00000607001 744 ntBASIC18.69■□□□□ 0.58
ATP2A2P16615 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A2P16615 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATP2A2P16615 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A2P16615 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A2P16615 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATP2A2P16615 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A2P16615 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A2P16615 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A2P16615 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A2P16615 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2A2P16615 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
ATP2A2P16615 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2A2P16615 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATP2A2P16615 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A2P16615 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATP2A2P16615 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A2P16615 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A2P16615 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
ATP2A2P16615 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
ATP2A2P16615 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 MYCLP1-201ENST00000372451 1075 ntBASIC18.68■□□□□ 0.58
ATP2A2P16615 MIR661-201ENST00000384842 89 ntBASIC18.68■□□□□ 0.58
ATP2A2P16615 GAPDHP21-201ENST00000450301 1010 ntBASIC18.68■□□□□ 0.58
ATP2A2P16615 KLF2P3-201ENST00000451977 1087 ntBASIC18.68■□□□□ 0.58
ATP2A2P16615 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2A2P16615 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A2P16615 RN7SL589P-201ENST00000481268 310 ntBASIC18.68■□□□□ 0.58
ATP2A2P16615 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.68■□□□□ 0.58
ATP2A2P16615 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A2P16615 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ATP2A2P16615 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 AC141586.5-201ENST00000624546 2050 ntBASIC18.68■□□□□ 0.58
ATP2A2P16615 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A2P16615 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A2P16615 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A2P16615 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATP2A2P16615 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A2P16615 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A2P16615 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 AC009949.1-201ENST00000623048 1830 ntBASIC18.67■□□□□ 0.58
ATP2A2P16615 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.67■□□□□ 0.58
ATP2A2P16615 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2A2P16615 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.67■□□□□ 0.58
ATP2A2P16615 AC002558.1-201ENST00000488906 803 ntBASIC18.67■□□□□ 0.58
ATP2A2P16615 AC079140.1-201ENST00000508039 487 ntBASIC18.67■□□□□ 0.58
ATP2A2P16615 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.67■□□□□ 0.58
ATP2A2P16615 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2A2P16615 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ATP2A2P16615 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A2P16615 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A2P16615 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2A2P16615 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2A2P16615 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2A2P16615 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A2P16615 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
ATP2A2P16615 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms