Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP2P08253 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP2P08253 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP2P08253 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP2P08253 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MMP2P08253 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP2P08253 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP2P08253 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 KRT8P39-201ENST00000396270 1433 ntBASIC16.96■□□□□ 0.31
MMP2P08253 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
MMP2P08253 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
MMP2P08253 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.96■□□□□ 0.31
MMP2P08253 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.96■□□□□ 0.31
MMP2P08253 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP2P08253 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
MMP2P08253 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP2P08253 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
MMP2P08253 AL022342.1-201ENST00000400363 863 ntBASIC16.96■□□□□ 0.31
MMP2P08253 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP2P08253 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.96■□□□□ 0.31
MMP2P08253 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP2P08253 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.96■□□□□ 0.31
MMP2P08253 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP2P08253 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.96■□□□□ 0.31
MMP2P08253 AL671883.3-201ENST00000603274 991 ntBASIC16.96■□□□□ 0.31
MMP2P08253 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP2P08253 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP2P08253 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.96■□□□□ 0.3
MMP2P08253 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
MMP2P08253 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.96■□□□□ 0.3
MMP2P08253 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.96■□□□□ 0.3
MMP2P08253 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP2P08253 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP2P08253 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MMP2P08253 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MMP2P08253 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.95■□□□□ 0.3
MMP2P08253 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 AC027601.4-201ENST00000611259 610 ntBASIC16.95■□□□□ 0.3
MMP2P08253 FAM197Y3-203ENST00000618346 717 ntBASIC16.95■□□□□ 0.3
MMP2P08253 AC004877.2-201ENST00000623941 599 ntBASIC16.95■□□□□ 0.3
MMP2P08253 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
MMP2P08253 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP2P08253 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
MMP2P08253 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 MIR574-201ENST00000385209 96 ntBASIC16.94■□□□□ 0.3
MMP2P08253 MED15P5-201ENST00000423150 992 ntBASIC16.94■□□□□ 0.3
MMP2P08253 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
MMP2P08253 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.94■□□□□ 0.3
MMP2P08253 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
MMP2P08253 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP2P08253 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 AL645728.2-201ENST00000641974 660 ntBASIC16.94■□□□□ 0.3
MMP2P08253 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms