Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DRAP01903 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DRAP01903 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DRAP01903 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
HLA-DRAP01903 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DRAP01903 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.14■□□□□ 0.5
HLA-DRAP01903 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HLA-DRAP01903 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 KRT18P2-201ENST00000447938 1258 ntBASIC18.14■□□□□ 0.49
HLA-DRAP01903 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DRAP01903 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DRAP01903 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 SNX33P1-201ENST00000592116 1762 ntBASIC18.13■□□□□ 0.49
HLA-DRAP01903 AL022342.1-201ENST00000400363 863 ntBASIC18.13■□□□□ 0.49
HLA-DRAP01903 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms