Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.86■□□□□ 0.45
ZBED1O96006 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.86■□□□□ 0.45
ZBED1O96006 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 TNRC18P3-201ENST00000441896 2691 ntBASIC17.86■□□□□ 0.45
ZBED1O96006 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.86■□□□□ 0.45
ZBED1O96006 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
ZBED1O96006 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.86■□□□□ 0.45
ZBED1O96006 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.86■□□□□ 0.45
ZBED1O96006 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ZBED1O96006 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.86■□□□□ 0.45
ZBED1O96006 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.86■□□□□ 0.45
ZBED1O96006 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZBED1O96006 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
ZBED1O96006 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ZBED1O96006 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.85■□□□□ 0.45
ZBED1O96006 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ZBED1O96006 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ZBED1O96006 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.85■□□□□ 0.45
ZBED1O96006 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.85■□□□□ 0.45
ZBED1O96006 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.85■□□□□ 0.45
ZBED1O96006 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ZBED1O96006 KRT18P2-201ENST00000447938 1258 ntBASIC17.85■□□□□ 0.45
ZBED1O96006 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.85■□□□□ 0.45
ZBED1O96006 PMS2P7-201ENST00000506558 1336 ntBASIC17.85■□□□□ 0.45
ZBED1O96006 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.85■□□□□ 0.45
ZBED1O96006 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.85■□□□□ 0.45
ZBED1O96006 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
ZBED1O96006 AC107918.2-201ENST00000530817 355 ntBASIC17.85■□□□□ 0.45
ZBED1O96006 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.85■□□□□ 0.45
ZBED1O96006 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.85■□□□□ 0.45
ZBED1O96006 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ZBED1O96006 DUX4L17-201ENST00000557360 1267 ntBASIC17.85■□□□□ 0.45
ZBED1O96006 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.85■□□□□ 0.45
ZBED1O96006 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.85■□□□□ 0.45
ZBED1O96006 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.85■□□□□ 0.45
ZBED1O96006 REXO1L3P-201ENST00000622202 1288 ntBASIC17.85■□□□□ 0.45
ZBED1O96006 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ZBED1O96006 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ZBED1O96006 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ZBED1O96006 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZBED1O96006 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ZBED1O96006 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ZBED1O96006 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.84■□□□□ 0.45
ZBED1O96006 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
ZBED1O96006 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.84■□□□□ 0.45
ZBED1O96006 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.84■□□□□ 0.45
ZBED1O96006 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZBED1O96006 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.84■□□□□ 0.45
ZBED1O96006 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.84■□□□□ 0.45
ZBED1O96006 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.84■□□□□ 0.45
ZBED1O96006 FAM185BP-201ENST00000443595 716 ntBASIC17.84■□□□□ 0.45
ZBED1O96006 CXCL1P1-201ENST00000502804 216 ntBASIC17.84■□□□□ 0.45
ZBED1O96006 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.84■□□□□ 0.45
ZBED1O96006 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ZBED1O96006 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ZBED1O96006 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZBED1O96006 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ZBED1O96006 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZBED1O96006 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.83■□□□□ 0.45
ZBED1O96006 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.83■□□□□ 0.45
ZBED1O96006 AL139384.1-201ENST00000612143 3047 ntBASIC17.83■□□□□ 0.45
ZBED1O96006 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZBED1O96006 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZBED1O96006 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.83■□□□□ 0.45
ZBED1O96006 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
ZBED1O96006 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms