Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ABCA1O95477 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCA1O95477 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCA1O95477 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCA1O95477 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 AC236430.1-201ENST00000402231 743 ntBASIC14.2□□□□□ -0.14
ABCA1O95477 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCA1O95477 FAM185BP-201ENST00000443595 716 ntBASIC14.2□□□□□ -0.14
ABCA1O95477 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCA1O95477 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 CXCL1P1-201ENST00000502804 216 ntBASIC14.2□□□□□ -0.14
ABCA1O95477 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.2□□□□□ -0.14
ABCA1O95477 AC140878.1-201ENST00000565277 250 ntBASIC14.2□□□□□ -0.14
ABCA1O95477 STK25P1-201ENST00000585406 838 ntBASIC14.2□□□□□ -0.14
ABCA1O95477 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCA1O95477 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.2□□□□□ -0.14
ABCA1O95477 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ABCA1O95477 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCA1O95477 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCA1O95477 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 AKAP8P1-201ENST00000434743 1349 ntBASIC14.19□□□□□ -0.14
ABCA1O95477 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.19□□□□□ -0.14
ABCA1O95477 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ABCA1O95477 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ABCA1O95477 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCA1O95477 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ABCA1O95477 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.19□□□□□ -0.14
ABCA1O95477 CRB3P1-201ENST00000449338 276 ntBASIC14.19□□□□□ -0.14
ABCA1O95477 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCA1O95477 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.19□□□□□ -0.14
ABCA1O95477 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.19□□□□□ -0.14
ABCA1O95477 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.19□□□□□ -0.14
ABCA1O95477 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.19□□□□□ -0.14
ABCA1O95477 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCA1O95477 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ABCA1O95477 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCA1O95477 AC063926.2-201ENST00000623766 1308 ntBASIC14.19□□□□□ -0.14
ABCA1O95477 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCA1O95477 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCA1O95477 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCA1O95477 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ABCA1O95477 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
ABCA1O95477 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.18□□□□□ -0.14
ABCA1O95477 AC087163.2-201ENST00000457299 853 ntBASIC14.18□□□□□ -0.14
ABCA1O95477 KRT8P48-201ENST00000515599 1220 ntBASIC14.18□□□□□ -0.14
ABCA1O95477 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCA1O95477 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.18□□□□□ -0.14
ABCA1O95477 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCA1O95477 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
ABCA1O95477 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.18□□□□□ -0.14
ABCA1O95477 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ABCA1O95477 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCA1O95477 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
ABCA1O95477 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCA1O95477 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ABCA1O95477 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCA1O95477 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms