Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SPDYE10P-202ENST00000612005 668 ntBASIC16.85■□□□□ 0.29
PCDH8O95206 SPDYE8P-202ENST00000612377 668 ntBASIC16.85■□□□□ 0.29
PCDH8O95206 AP001350.2-201ENST00000625104 1094 ntBASIC16.85■□□□□ 0.29
PCDH8O95206 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH8O95206 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH8O95206 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 AL121761.2-201ENST00000598007 1648 ntBASIC16.85■□□□□ 0.29
PCDH8O95206 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH8O95206 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH8O95206 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH8O95206 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH8O95206 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH8O95206 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.84■□□□□ 0.29
PCDH8O95206 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH8O95206 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 AC087641.1-201ENST00000557561 1021 ntBASIC16.84■□□□□ 0.29
PCDH8O95206 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDH8O95206 AC022145.2-201ENST00000598203 171 ntBASIC16.84■□□□□ 0.29
PCDH8O95206 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH8O95206 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 AL161645.1-201ENST00000622716 1255 ntBASIC16.84■□□□□ 0.29
PCDH8O95206 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDH8O95206 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDH8O95206 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDH8O95206 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 SLC22A20-204ENST00000530038 1673 ntBASIC16.84■□□□□ 0.29
PCDH8O95206 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 LINC02012-201ENST00000608206 1725 ntBASIC16.84■□□□□ 0.29
PCDH8O95206 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDH8O95206 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH8O95206 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
PCDH8O95206 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.83■□□□□ 0.29
PCDH8O95206 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH8O95206 AC106820.2-201ENST00000563775 3264 ntBASIC16.83■□□□□ 0.29
PCDH8O95206 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PCDH8O95206 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDH8O95206 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.83■□□□□ 0.29
PCDH8O95206 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
PCDH8O95206 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PCDH8O95206 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH8O95206 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 TSEN15P1-201ENST00000423257 515 ntBASIC16.83■□□□□ 0.28
PCDH8O95206 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDH8O95206 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDH8O95206 AC004449.1-201ENST00000564240 433 ntBASIC16.83■□□□□ 0.28
PCDH8O95206 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDH8O95206 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDH8O95206 KRT8P49-201ENST00000604166 1432 ntBASIC16.83■□□□□ 0.28
PCDH8O95206 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH8O95206 AC131009.4-201ENST00000624048 1740 ntBASIC16.83■□□□□ 0.28
PCDH8O95206 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDH8O95206 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
PCDH8O95206 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms