Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
SUPT3HO75486 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SUPT3HO75486 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
SUPT3HO75486 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SUPT3HO75486 SPDYE21P-201ENST00000413323 827 ntBASIC16.83■□□□□ 0.28
SUPT3HO75486 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SUPT3HO75486 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SUPT3HO75486 NUS1P1-201ENST00000446295 882 ntBASIC16.83■□□□□ 0.28
SUPT3HO75486 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.83■□□□□ 0.28
SUPT3HO75486 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.83■□□□□ 0.28
SUPT3HO75486 AC091076.1-201ENST00000610741 619 ntBASIC16.83■□□□□ 0.28
SUPT3HO75486 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 AC093458.2-201ENST00000623150 629 ntBASIC16.83■□□□□ 0.28
SUPT3HO75486 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.83■□□□□ 0.28
SUPT3HO75486 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SUPT3HO75486 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SUPT3HO75486 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SUPT3HO75486 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.82■□□□□ 0.28
SUPT3HO75486 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
SUPT3HO75486 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.82■□□□□ 0.28
SUPT3HO75486 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SUPT3HO75486 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.82■□□□□ 0.28
SUPT3HO75486 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.82■□□□□ 0.28
SUPT3HO75486 ARMC10P1-201ENST00000313754 855 ntBASIC16.82■□□□□ 0.28
SUPT3HO75486 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SUPT3HO75486 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.82■□□□□ 0.28
SUPT3HO75486 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.82■□□□□ 0.28
SUPT3HO75486 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.82■□□□□ 0.28
SUPT3HO75486 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.82■□□□□ 0.28
SUPT3HO75486 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.82■□□□□ 0.28
SUPT3HO75486 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.82■□□□□ 0.28
SUPT3HO75486 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.82■□□□□ 0.28
SUPT3HO75486 AC138894.3-201ENST00000603787 634 ntBASIC16.82■□□□□ 0.28
SUPT3HO75486 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.82■□□□□ 0.28
SUPT3HO75486 AP000867.4-201ENST00000641616 219 ntBASIC16.82■□□□□ 0.28
SUPT3HO75486 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SUPT3HO75486 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SUPT3HO75486 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.82■□□□□ 0.28
SUPT3HO75486 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SUPT3HO75486 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SUPT3HO75486 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.81■□□□□ 0.28
SUPT3HO75486 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SUPT3HO75486 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.81■□□□□ 0.28
SUPT3HO75486 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 AC097637.2-201ENST00000624096 1997 ntBASIC16.81■□□□□ 0.28
SUPT3HO75486 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.81■□□□□ 0.28
SUPT3HO75486 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.81■□□□□ 0.28
SUPT3HO75486 ATP5G2P1-201ENST00000433580 426 ntBASIC16.81■□□□□ 0.28
SUPT3HO75486 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.81■□□□□ 0.28
SUPT3HO75486 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.81■□□□□ 0.28
SUPT3HO75486 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.81■□□□□ 0.28
SUPT3HO75486 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SUPT3HO75486 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SUPT3HO75486 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.81■□□□□ 0.28
SUPT3HO75486 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SUPT3HO75486 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.81■□□□□ 0.28
SUPT3HO75486 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.81■□□□□ 0.28
SUPT3HO75486 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SUPT3HO75486 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms