Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SORBS3O60504 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SORBS3O60504 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SORBS3O60504 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.99■□□□□ 0.63
SORBS3O60504 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SORBS3O60504 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SORBS3O60504 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SORBS3O60504 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SORBS3O60504 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.98■□□□□ 0.63
SORBS3O60504 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.98■□□□□ 0.63
SORBS3O60504 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.98■□□□□ 0.63
SORBS3O60504 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.98■□□□□ 0.63
SORBS3O60504 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.98■□□□□ 0.63
SORBS3O60504 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.98■□□□□ 0.63
SORBS3O60504 AL627223.1-201ENST00000416693 442 ntBASIC18.98■□□□□ 0.63
SORBS3O60504 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.98■□□□□ 0.63
SORBS3O60504 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.98■□□□□ 0.63
SORBS3O60504 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 AC243562.1-201ENST00000560672 389 ntBASIC18.98■□□□□ 0.63
SORBS3O60504 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.98■□□□□ 0.63
SORBS3O60504 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.98■□□□□ 0.63
SORBS3O60504 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SORBS3O60504 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.98■□□□□ 0.63
SORBS3O60504 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 AC092068.3-201ENST00000587894 2016 ntBASIC18.98■□□□□ 0.63
SORBS3O60504 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SORBS3O60504 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SORBS3O60504 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SORBS3O60504 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 AL353732.1-201ENST00000569618 1459 ntBASIC18.97■□□□□ 0.63
SORBS3O60504 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.97■□□□□ 0.63
SORBS3O60504 FAM58DP-201ENST00000428076 619 ntBASIC18.97■□□□□ 0.63
SORBS3O60504 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.97■□□□□ 0.63
SORBS3O60504 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.97■□□□□ 0.63
SORBS3O60504 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.97■□□□□ 0.63
SORBS3O60504 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.97■□□□□ 0.63
SORBS3O60504 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.97■□□□□ 0.63
SORBS3O60504 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SORBS3O60504 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.97■□□□□ 0.63
SORBS3O60504 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SORBS3O60504 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.97■□□□□ 0.63
SORBS3O60504 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.97■□□□□ 0.63
SORBS3O60504 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SORBS3O60504 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.96■□□□□ 0.63
SORBS3O60504 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SORBS3O60504 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.96■□□□□ 0.63
SORBS3O60504 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SORBS3O60504 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
SORBS3O60504 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
SORBS3O60504 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.96■□□□□ 0.63
SORBS3O60504 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.96■□□□□ 0.63
SORBS3O60504 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.96■□□□□ 0.63
SORBS3O60504 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.96■□□□□ 0.63
SORBS3O60504 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.96■□□□□ 0.63
SORBS3O60504 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.96■□□□□ 0.63
SORBS3O60504 AL009183.1-201ENST00000603760 355 ntBASIC18.96■□□□□ 0.63
SORBS3O60504 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.96■□□□□ 0.63
SORBS3O60504 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.96■□□□□ 0.63
SORBS3O60504 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.96■□□□□ 0.63
SORBS3O60504 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SORBS3O60504 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SORBS3O60504 AC012313.1-201ENST00000593393 3059 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms