Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SURF4O15260 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.3■□□□□ 0.04
SURF4O15260 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.3■□□□□ 0.04
SURF4O15260 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.3■□□□□ 0.04
SURF4O15260 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
SURF4O15260 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 INTS4P1-201ENST00000438455 1935 ntBASIC15.29■□□□□ 0.04
SURF4O15260 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
SURF4O15260 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.29■□□□□ 0.04
SURF4O15260 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 AP002414.1-201ENST00000391405 1147 ntBASIC15.29■□□□□ 0.04
SURF4O15260 ATP5G2P1-201ENST00000433580 426 ntBASIC15.29■□□□□ 0.04
SURF4O15260 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.29■□□□□ 0.04
SURF4O15260 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.29■□□□□ 0.04
SURF4O15260 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
SURF4O15260 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SURF4O15260 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.29■□□□□ 0.04
SURF4O15260 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SURF4O15260 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SURF4O15260 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SURF4O15260 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.28■□□□□ 0.04
SURF4O15260 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.28■□□□□ 0.04
SURF4O15260 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SURF4O15260 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
SURF4O15260 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.28■□□□□ 0.04
SURF4O15260 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SURF4O15260 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.28■□□□□ 0.04
SURF4O15260 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.28■□□□□ 0.04
SURF4O15260 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SURF4O15260 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.28■□□□□ 0.04
SURF4O15260 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SURF4O15260 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SURF4O15260 AL020989.1-201ENST00000422979 469 ntBASIC15.28■□□□□ 0.04
SURF4O15260 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.28■□□□□ 0.04
SURF4O15260 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.28■□□□□ 0.04
SURF4O15260 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.28■□□□□ 0.04
SURF4O15260 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.28■□□□□ 0.04
SURF4O15260 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.28■□□□□ 0.04
SURF4O15260 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms