Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.22□□□□□ -0.61
RTL8CO15255 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.22□□□□□ -0.61
RTL8CO15255 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.22□□□□□ -0.61
RTL8CO15255 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 AC027369.6-201ENST00000525520 931 ntBASIC11.22□□□□□ -0.61
RTL8CO15255 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.22□□□□□ -0.61
RTL8CO15255 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.22□□□□□ -0.61
RTL8CO15255 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.22□□□□□ -0.61
RTL8CO15255 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.22□□□□□ -0.61
RTL8CO15255 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.22□□□□□ -0.61
RTL8CO15255 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RTL8CO15255 MIR6752-201ENST00000618442 71 ntBASIC11.22□□□□□ -0.61
RTL8CO15255 AL590560.3-201ENST00000623350 461 ntBASIC11.22□□□□□ -0.61
RTL8CO15255 AC073592.8-201ENST00000624126 511 ntBASIC11.22□□□□□ -0.61
RTL8CO15255 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
RTL8CO15255 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.22□□□□□ -0.61
RTL8CO15255 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC11.21□□□□□ -0.61
RTL8CO15255 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.21□□□□□ -0.61
RTL8CO15255 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
RTL8CO15255 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.21□□□□□ -0.61
RTL8CO15255 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 TSSK5P-201ENST00000423978 907 ntBASIC11.21□□□□□ -0.61
RTL8CO15255 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.21□□□□□ -0.61
RTL8CO15255 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.21□□□□□ -0.61
RTL8CO15255 AC004233.3-201ENST00000607794 1269 ntBASIC11.21□□□□□ -0.61
RTL8CO15255 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTL8CO15255 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.21□□□□□ -0.62
RTL8CO15255 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.21□□□□□ -0.62
RTL8CO15255 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.21□□□□□ -0.62
RTL8CO15255 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
RTL8CO15255 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
RTL8CO15255 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
RTL8CO15255 AL354751.1-201ENST00000412768 1863 ntBASIC11.21□□□□□ -0.62
RTL8CO15255 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.21□□□□□ -0.62
RTL8CO15255 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.21□□□□□ -0.62
RTL8CO15255 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC11.21□□□□□ -0.62
RTL8CO15255 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC11.21□□□□□ -0.62
RTL8CO15255 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.21□□□□□ -0.62
RTL8CO15255 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RTL8CO15255 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms