Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.48
O00370 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.02■□□□□ 0.48
O00370 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.02■□□□□ 0.48
O00370 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
O00370 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
O00370 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.02■□□□□ 0.48
O00370 SLC25A1P1-201ENST00000528351 927 ntBASIC18.02■□□□□ 0.48
O00370 AC107918.2-201ENST00000530817 355 ntBASIC18.02■□□□□ 0.48
O00370 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
O00370 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
O00370 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 AC104109.2-201ENST00000602919 1418 ntBASIC18.02■□□□□ 0.48
O00370 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.02■□□□□ 0.48
O00370 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
O00370 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.02■□□□□ 0.47
O00370 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
O00370 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.02■□□□□ 0.47
O00370 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
O00370 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 TUBB8P12-201ENST00000308911 1335 ntBASIC18.01■□□□□ 0.47
O00370 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.01■□□□□ 0.47
O00370 TUBB7P-202ENST00000428444 1305 ntBASIC18.01■□□□□ 0.47
O00370 TUBB8P7-204ENST00000567960 1332 ntBASIC18.01■□□□□ 0.47
O00370 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
O00370 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.01■□□□□ 0.47
O00370 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
O00370 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 PCDHB17P-201ENST00000539533 2393 ntBASIC18.01■□□□□ 0.47
O00370 PCDHB19P-201ENST00000570871 2371 ntBASIC18.01■□□□□ 0.47
O00370 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.01■□□□□ 0.47
O00370 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.01■□□□□ 0.47
O00370 PRSS29P-201ENST00000440800 595 ntBASIC18.01■□□□□ 0.47
O00370 RPL13AP23-201ENST00000480739 586 ntBASIC18.01■□□□□ 0.47
O00370 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.01■□□□□ 0.47
O00370 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
O00370 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.01■□□□□ 0.47
O00370 AC034105.1-201ENST00000563488 319 ntBASIC18.01■□□□□ 0.47
O00370 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
O00370 AC120114.3-201ENST00000611923 658 ntBASIC18.01■□□□□ 0.47
O00370 AC010654.1-201ENST00000615722 808 ntBASIC18.01■□□□□ 0.47
O00370 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
O00370 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.01■□□□□ 0.47
O00370 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
O00370 AL021920.2-201ENST00000624828 1351 ntBASIC18.01■□□□□ 0.47
O00370 AL162727.3-201ENST00000635661 2787 ntBASIC18.01■□□□□ 0.47
O00370 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
O00370 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18■□□□□ 0.47
O00370 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
O00370 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18■□□□□ 0.47
O00370 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18■□□□□ 0.47
O00370 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18■□□□□ 0.47
O00370 KRT8P49-201ENST00000604166 1432 ntBASIC18■□□□□ 0.47
O00370 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18■□□□□ 0.47
O00370 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18■□□□□ 0.47
O00370 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18■□□□□ 0.47
O00370 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18■□□□□ 0.47
O00370 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
O00370 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18■□□□□ 0.47
O00370 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18■□□□□ 0.47
O00370 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18■□□□□ 0.47
O00370 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
O00370 AC011270.2-201ENST00000624293 2550 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms