Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC188H7C350 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC188H7C350 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC188H7C350 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC188H7C350 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC188H7C350 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC188H7C350 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC188H7C350 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC188H7C350 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC188H7C350 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC188H7C350 AC002310.6-201ENST00000624451 1377 ntBASIC17.59■□□□□ 0.41
CCDC188H7C350 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC188H7C350 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC188H7C350 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC188H7C350 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.59■□□□□ 0.41
CCDC188H7C350 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC188H7C350 AC097493.4-201ENST00000641197 219 ntBASIC17.59■□□□□ 0.41
CCDC188H7C350 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC188H7C350 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.59■□□□□ 0.41
CCDC188H7C350 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCDC188H7C350 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC188H7C350 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC188H7C350 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC188H7C350 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC188H7C350 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC188H7C350 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC188H7C350 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC188H7C350 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC188H7C350 GGT3P-204ENST00000453783 1664 ntBASIC17.58■□□□□ 0.41
CCDC188H7C350 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC188H7C350 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC188H7C350 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC188H7C350 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC188H7C350 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC188H7C350 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC188H7C350 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC188H7C350 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC188H7C350 AL020989.1-201ENST00000422979 469 ntBASIC17.58■□□□□ 0.4
CCDC188H7C350 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC188H7C350 KRT8P26-201ENST00000534154 1276 ntBASIC17.58■□□□□ 0.4
CCDC188H7C350 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC188H7C350 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC188H7C350 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC188H7C350 AC006011.2-201ENST00000621313 1158 ntBASIC17.58■□□□□ 0.4
CCDC188H7C350 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC188H7C350 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC188H7C350 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC188H7C350 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC188H7C350 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC188H7C350 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC188H7C350 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC188H7C350 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC188H7C350 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC188H7C350 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 AC005521.1-201ENST00000393351 872 ntBASIC17.57■□□□□ 0.4
CCDC188H7C350 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms