Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC136621.1-201ENST00000624017 2304 ntBASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FLJ16779-201ENST00000612722 7638 ntBASIC14.78□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.77□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 CDCA4P2-201ENST00000441182 718 ntBASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AF201337.1-201ENST00000520239 748 ntBASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 C2orf69P4-201ENST00000565394 541 ntBASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AC105036.2-201ENST00000569468 176 ntBASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AC005562.1-201ENST00000583030 3219 ntBASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 KRT17P1-201ENST00000399211 1546 ntBASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 KRT8P3-201ENST00000519669 1449 ntBASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AL391256.1-201ENST00000443260 1855 ntBASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AP000593.1-201ENST00000393668 712 ntBASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms