Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 AC005363.2-201ENST00000618631 242 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 AC024909.3-201ENST00000611513 2257 ntBASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV5A0A0B4J249 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 AC105917.1-201ENST00000506637 2539 ntBASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 AP002490.2-201ENST00000524791 560 ntBASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 AL592071.1-201ENST00000611956 408 ntBASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 AC068418.2-201ENST00000577309 3703 ntBASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV5A0A0B4J249 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 TUBB8P12-201ENST00000308911 1335 ntBASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 TUBB7P-202ENST00000428444 1305 ntBASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 TUBB8P7-204ENST00000567960 1332 ntBASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV5A0A0B4J249 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms