Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 HCG4P8-203ENST00000443049 980 ntBASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 AP002414.4-201ENST00000589764 1148 ntBASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 AL592071.1-201ENST00000611956 408 ntBASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.45■□□□□ 0.7
R3HCC1Q9Y3T6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 AC093010.1-201ENST00000473625 1624 ntBASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 AC092384.3-202ENST00000564646 2873 ntBASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 AP002414.2-201ENST00000591780 3365 ntBASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
R3HCC1Q9Y3T6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 ATP5G2P1-201ENST00000433580 426 ntBASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 AC092119.3-201ENST00000612618 583 ntBASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 LINC00304-203ENST00000565008 1864 ntBASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
R3HCC1Q9Y3T6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 RNF216P1-203ENST00000404404 2427 ntBASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 LINC00265-3P-201ENST00000447588 903 ntBASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 Z69720.1-201ENST00000601483 472 ntBASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms