Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 AC046185.3-201ENST00000623228 1824 ntBASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 FAM220CP-201ENST00000395253 831 ntBASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 VENTXP7-201ENST00000475503 772 ntBASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 RN7SL850P-201ENST00000579959 291 ntBASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 LINC02012-201ENST00000608206 1725 ntBASIC16.48■□□□□ 0.23
PCDHGB4Q9UN71 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 TMPOP1-202ENST00000424642 1267 ntBASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 KRT8P26-201ENST00000534154 1276 ntBASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 AL136038.3-201ENST00000561909 1096 ntBASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 AC068587.6-202ENST00000641839 5619 ntBASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGB4Q9UN71 AC022188.1-201ENST00000620960 1664 ntBASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 AC144831.1-201ENST00000573312 2656 ntBASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 AC019129.2-201ENST00000609837 1235 ntBASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGB4Q9UN71 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms