Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 AC132938.5-201ENST00000624980 1813 ntBASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00474Q9P2X8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 NCF1C-201ENST00000438382 1427 ntBASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AL023806.1-201ENST00000603994 1649 ntBASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 KRT126P-201ENST00000549467 1181 ntBASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 IFNL4P1-201ENST00000607083 540 ntBASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AL732292.2-201ENST00000609649 430 ntBASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AL589182.2-201ENST00000619332 1049 ntBASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC00474Q9P2X8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 LINC00896-202ENST00000609602 2128 ntBASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms