Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 AC027369.6-201ENST00000525520 931 ntBASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 AC003101.2-201ENST00000612557 442 ntBASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC10Q9NYD6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 AC007967.4-201ENST00000614700 386 ntBASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 AL590560.3-201ENST00000623350 461 ntBASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 AC073592.8-201ENST00000624126 511 ntBASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HOXC10Q9NYD6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms