Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.18■□□□□ 0.18
BRF2Q9HAW0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRF2Q9HAW0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRF2Q9HAW0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BRF2Q9HAW0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.17■□□□□ 0.18
BRF2Q9HAW0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 MPDU1-223ENST00000582151 728 ntBASIC16.17■□□□□ 0.18
BRF2Q9HAW0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRF2Q9HAW0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 AC073621.1-201ENST00000392730 636 ntBASIC16.16■□□□□ 0.18
BRF2Q9HAW0 RPS15P9-201ENST00000494093 319 ntBASIC16.16■□□□□ 0.18
BRF2Q9HAW0 AC136632.2-201ENST00000512891 861 ntBASIC16.16■□□□□ 0.18
BRF2Q9HAW0 MIR4492-201ENST00000581627 80 ntBASIC16.16■□□□□ 0.18
BRF2Q9HAW0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.16■□□□□ 0.18
BRF2Q9HAW0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 RPS2P1-201ENST00000434010 821 ntBASIC16.15■□□□□ 0.18
BRF2Q9HAW0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 SLC25A6P2-201ENST00000497974 877 ntBASIC16.15■□□□□ 0.18
BRF2Q9HAW0 RNPS1P1-201ENST00000507437 918 ntBASIC16.15■□□□□ 0.18
BRF2Q9HAW0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 UNC93B7-201ENST00000509439 705 ntBASIC16.15■□□□□ 0.18
BRF2Q9HAW0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms