Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PIF1Q9H611 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.24■□□□□ 0.19
PIF1Q9H611 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.24■□□□□ 0.19
PIF1Q9H611 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PIF1Q9H611 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 FRMD8P1-201ENST00000440433 1524 ntBASIC16.24■□□□□ 0.19
PIF1Q9H611 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
PIF1Q9H611 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.23■□□□□ 0.19
PIF1Q9H611 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PIF1Q9H611 AC007950.2-201ENST00000615045 2347 ntBASIC16.23■□□□□ 0.19
PIF1Q9H611 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PIF1Q9H611 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.23■□□□□ 0.19
PIF1Q9H611 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 AL121956.5-201ENST00000625261 221 ntBASIC16.23■□□□□ 0.19
PIF1Q9H611 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.23■□□□□ 0.19
PIF1Q9H611 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.23■□□□□ 0.19
PIF1Q9H611 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 CYP2T1P-202ENST00000641596 2535 ntBASIC16.23■□□□□ 0.19
PIF1Q9H611 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PIF1Q9H611 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PIF1Q9H611 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.23■□□□□ 0.19
PIF1Q9H611 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PIF1Q9H611 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 HLA-A-202ENST00000376806 1854 ntBASIC16.22■□□□□ 0.19
PIF1Q9H611 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PIF1Q9H611 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 AC125634.1-201ENST00000438758 1403 ntBASIC16.22■□□□□ 0.19
PIF1Q9H611 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.22■□□□□ 0.19
PIF1Q9H611 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.22■□□□□ 0.19
PIF1Q9H611 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 AL136038.3-201ENST00000561909 1096 ntBASIC16.22■□□□□ 0.19
PIF1Q9H611 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 AL645728.1-201ENST00000366221 2101 ntBASIC16.22■□□□□ 0.19
PIF1Q9H611 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.22■□□□□ 0.19
PIF1Q9H611 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.22■□□□□ 0.19
PIF1Q9H611 AL391256.1-201ENST00000443260 1855 ntBASIC16.22■□□□□ 0.19
PIF1Q9H611 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PIF1Q9H611 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PIF1Q9H611 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PIF1Q9H611 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.21■□□□□ 0.19
PIF1Q9H611 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.21■□□□□ 0.19
PIF1Q9H611 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.21■□□□□ 0.19
PIF1Q9H611 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.21■□□□□ 0.19
PIF1Q9H611 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PIF1Q9H611 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms