Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J2Q9GZM3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 AP002414.4-201ENST00000589764 1148 ntBASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 AC073592.4-201ENST00000623827 446 ntBASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 RNF216P1-203ENST00000404404 2427 ntBASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.69■□□□□ 0.1
POLR2J2Q9GZM3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 TSPY26P-202ENST00000565928 3884 ntBASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 AL021920.2-201ENST00000624828 1351 ntBASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 RCN1P2-201ENST00000398357 915 ntBASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 PCED1CP-201ENST00000419887 785 ntBASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 AP002383.4-201ENST00000442518 975 ntBASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 NUS1P1-201ENST00000446295 882 ntBASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 AC092171.3-201ENST00000610122 2651 ntBASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
POLR2J2Q9GZM3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 AL596257.1-201ENST00000641463 2694 ntBASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 IER3-202ENST00000376377 1350 ntBASIC15.67■□□□□ 0.1
POLR2J2Q9GZM3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms